OME-NGFF data from the IDRalpha

This page lists a number of studies from the Image Data Resource that have been converted into the OME-NGFF format

Summary	Study title	Release date	Imaging method / organism
S-BIAD800 3 images	Imaging Mass Cytometry of human tonsil sections (OME-NGFF)	2023-07-07	imaging mass cytometry Homo sapiens (human)
S-BIAD815 5 images	In Toto Cell Tracking using Lightsheet Microscopy of the Neuromesodermal Progenitor Zone of the Zebrafish Tailbud from the 21st Somite Stage (OME-NGFF)	2023-07-12	SPIM Danio rerio (zebrafish)
S-BIAD845 68 images	Clustering phenotype populations by genome-wide RNAi and multiparametric imaging (OME-NGFF)	2023-08-15	fluorescence microscopy Homo sapiens (human)
S-BIAD846 3 images	Systematic validation of antibody binding and protein subcellular localization using siRNA and confocal microscopy (OME-NGFF)	2023-08-15	confocal microscopy Homo sapiens (human)
S-BIAD847 55 images	High-Content Phenotypic Profiling of Drug Response Signatures across Distinct Cancer Cells (OME-NGFF)	2023-08-14	fluorescence microscopy Homo sapiens (human)
S-BIAD848 12 images	Systematic morphological profiling of human gene and allele function via Cell Painting (OME-NGFF)	2023-08-15	fluorescence microscopy Homo sapiens (human)
S-BIAD851 413 images	Human U2OS cells - compound cell-painting experiment (OME-NGFF)	2023-08-18	fluorescence microscopy Homo sapiens (human)
S-BIAD852 342 images	Subpopulations of sensorless bacteria drive fitness in fluctuating environments (OME-NGFF)	2023-08-18	wide-field epi-fluorescence microscopy Escherichia coli
S-BIAD855 20 images	Human U2OS cells - compound-profiling Cell Painting experiment (OME-NGFF)	2023-08-22	fluorescence microscopy Homo sapiens (human)
S-BIAD860 111 images	Focusing and sustaining the antitumor CTL effector killer response by agonist anti-CD137 mAb (OME-NGFF)	2023-08-23	multi-photon microscopy Mus musculus (mouse)
S-BIAD861 84 images	Quantitative 3D-imaging for cell biology and ecology of environmental microbial eukaryotes (OME-NGFF)	2023-08-25	confocal microscopy Mixed sample
S-BIAD865 538 images	Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes (OME-NGFF)	2023-08-29	fluorescence microscopy Homo sapiens (human)
S-BIAD866 182 images	Protein Kinase C and the stress response pathways are required for kinetochore homeostasis (OME-NGFF)	2023-08-30	fluorescence microscopy Saccharomyces cerevisiae (brewer's yeast)
S-BIAD867 46 images	Genome-wide analysis of Rad52 foci reveals diverse mechanisms impacting recombination (OME-NGFF)	2023-09-01	fluorescence microscopy Saccharomyces cerevisiae (brewer's yeast)
S-BIAD882 22 images	A machine learning approach to define antimalarial drug action from heterogeneous cell-based screens (OME-NGFF)	2023-09-05	fluorescence microscopy Plasmodium falciparum 3D7
S-BIAD885 147 images	High content screen for genes whose downregulation by RNAi affects acccumulation of p53-binding protein 1 (53BP1) at sites of double strand breaks (OME-NGFF)	2023-09-06	fluorescence microscopy Homo sapiens (human)
S-BIAD992 9 images	A live-cell screen for altered Erk dynamics reveals principles of proliferative control (OME-NGFF)	2024-01-04	spinning disk confocal microscopy Mus musculus (mouse)