S-BIAD599:IM5alpha

20200220-ftp/experimentK/50A3A129F9/50A3A129F9_8bit_pea3smFISH.tif

Study Title: An image-based data-driven analysis of cellular architecture in a developing tissue

By: Jonas Hartmann, Mie Wong, Elisa Gallo, Darren Gilmour

Organism: Danio rerio (zebrafish)

Image Dimensions : 1572 x 780 x 130

Number of Channels : 1

Number of Time Points : 1

Channels : pea3smFISH:pea3 RNA

Characteristics [Organism Part] : primary posterior lateral line primordium

Characteristics [Organism] : Danio rerio

Comment [Fluorescent Label Reference DOIs] : 10.1016/j.devcel.2006.02.019; 10.1038/nature13852

Comment [Gene Annotation Comments] : Transcript identifier and gene symbol from Ensembl release 99, Jan 2020

Comment [Image File Path] : ./50A3A129F9/50A3A129F9_8bit_pea3smFISH.tif

Comment [Image File Type] : raw

Dataset Name : membranes_pea3fish

Experimental Condition [Fluorescent Labels] : pea3 smFISH

Gene Identifier : ENSDART00000013033

Gene Symbol : pea3

Image File : 50A3A129F9_8bit_pea3smFISH.tif

Image Name : 50A3A129F9

Term Source 1 Accession : NCBITaxon_7955

Term Source 1 REF : NCBITaxon

Term Source 2 Accession : ZFA_0005115

Term Source 2 REF : ZFA

big_endian : True

channels :
  {
    id: Channel:0:0,
    color: white,
    samples_per_pixel: 1
  }

dimension_order : XYZCT

download_size : 152.0MiB

interleaved : False

metadata_only : True

physical_size_x : 0.08519643016734027

physical_size_x_unit : µm

physical_size_y : 0.08519643016734027

physical_size_y_unit : µm

physical_size_z : 0.18673573391426246

physical_size_z_unit : µm

significant_bits : 8

size_c : 1

size_t : 1

size_x : 1572

size_y : 780

size_z : 130

type : uint8