S-BIAD570alpha

A spatially resolved atlas of the human lung characterizes a gland-associated immune niche

Released 2022-10-24
Amanda Oliver, Elo Madissoon, Kerstin Meyer

Content

  • 109 images
Multiplexed single molecule fluorescence in situ hybridisation (smFISH) using RNAscope protocol with immunohistochemistry (IHC) on human lung and airway tissue fresh frozen in optimum cutting temperature compound. IBEX (iterative bleaching extends multiplexity) multiplex IHC on human lung and airway tissue fixed in paraformaldyhyde and frozen in optimum cutting temperature compound.

Study information

Organism
Mus musculus (mouse)
Imaging type
confocal fluorescence microscopy
License
CC0

Viewable images

Image ID Preview Filename Dimensions
(T, C, Z, Y, X)
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IM2 Gut_AMSbio_IgA_1_2_Nucleus_autofluorescence_IgA_Meas1_A02_F2T0_max.ome.tif (1, 3, 1, 8192, 10203) Unavailable
IM54 KM_LNG_00PY_A37-LNG_Nucleus_PDZRN4_SCN7A_MLIP_Meas2_A2_F1T1_max.ome.tif (1, 4, 1, 15370, 17571) Unavailable
IM1 Gut_AMSbio_IgA_1_2_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif (1, 3, 1, 10203, 8192) Unavailable

All images

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Image ID Filename Download Size Actions
IM97 Fig4gED10j_Day3-IgG.tif Unavailable Download
IM91 Fig4gED10j_Day2-CD4.tif Unavailable Download
IM64 KM_LNG_00FU_A41-LNG_Nucleus_MPZ_ANGPTL7_THBS4_Meas2_max_A2_F1T0.ome.tif Unavailable Download
IM67 KM_LNG_00DZ_A42-LNG_Nucleus_MUC5B_LPO_ALDH1A3_Meas2_A1_F1T0.ome.tif Unavailable Download
IM14 KM_LNG_1049_A42-LNG_Nucleus_IgA2 (IHC)_CCR10_CCL28_Meas2_A02_F1T1_max.ome.tif Unavailable Download
IM12 KM_LNG_1048_A63-LNG_Nucleus_IgA2 (IHC)_CCR10_CCL28_Meas2_A02_F1T1_max.ome.tif Unavailable Download
IM2 Gut_AMSbio_IgA_1_2_Nucleus_autofluorescence_IgA_Meas1_A02_F2T0_max.ome.tif Unavailable Download
IM56 KM_LNG_00Q0_A42-LNG_Nucleus_PDZRN4_SCN7A_MLIP_Meas2_A2_F1T1_max.ome.tif Unavailable Download
IM61 KM_LNG_00Q5_A42-LNG_Nucleus_SOX10_SCN7A_SLC2A1_Meas2_A2_F1T1_max.ome.tif Unavailable Download
IM6 Trachea_AMSbio_IgA_1_2_Nucleus_autofluorescence_IgA_Meas1_A02_F2T0_max.ome.tif Unavailable Download
IM82 KM_LNG_00E2_A37-LNG_Nucleus_SCGB1A1_FOXJ1_RARRES1_Meas2_A2_F1T0.ome.tif Unavailable Download
IM115 FigED9h_IgA2image-IgA2.tif Unavailable Download
IM22 KM_LNG_1092_STAN-09878_2022-02-07.tiff Unavailable Download
IM31 KM_LNG_1114_STAN-0B0E7_2022-02-10.tiff Unavailable Download
IM111 Fig5kED10i10k_Day2-HLA-DR.tif Unavailable Download
IM110 Fig5kED10i10k_Day2-EpCAM.tif Unavailable Download
IM86 Fig4gED10j_Day1-CD19.tif Unavailable Download
IM20 KM_LNG_1091_STAN-099C0_2022-02-07.tiff Unavailable Download
IM98 Fig4gED10j_Day4-CD45.tif Unavailable Download
IM32 KM_LNG_1095_STAN-099DF_2022-02-08.tiff Unavailable Download
IM113 Fig5kED10i10k_Day2-IgA2.tif Unavailable Download
IM108 Fig5kED10i10k_Day1-CD4.tif Unavailable Download
IM68 KM_LNG_00H9_A41-LNG_Nucleus_MUC5B_LPO_ALDH1A3_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM84 KM_LNG_00HD_A41-LNG_Nucleus_SCGB1A1_FOXJ1_RARRES1_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM60 KM_LNG_00Q4_A42-LNG_Nucleus_PDZRN4_SCN7A_MLIP_Meas2_A2_F1T1_max.ome.tif Unavailable Download
IM72 KM_LNG_00H7_A41-LNG_Nucleus_MUC5B_LPO_RARRES1_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM106 Fig5kED10i10k_Day1-CD45RA.tif Unavailable Download
IM59 KM_LNG_00Q3_A41-LNG_Nucleus_SOX10_SCN7A_SLC2A1_Meas2_A2_F1T1_max.ome.tif Unavailable Download
IM101 Fig5j_637cLNG-2R3-EpCAM.tif Unavailable Download
IM33 KM_LNG_1096_STAN-09887_2022-02-08.tiff Unavailable Download
IM11 KM_LNG_1050_A37-LNG_Nucleus_IgA2 (IHC)_CCR10_CCL28_Meas2_A02_F1T1_max.ome.tif Unavailable Download
IM117 FigED9h_IgD+IgGimage-IgD.tif Unavailable Download
IM37 KM_LNG_1197_STAN-0BEB0_2022-03-02.tiff Unavailable Download
IM70 KM_LNG_00DU_A37-LNG_Nucleus_MUC5B_LPO_RARRES1_Meas2_A1_F1T0.ome.tif Unavailable Download
IM21 KM_LNG_1103_STAN-099FD_2022-02-08.tiff Unavailable Download
IM24 KM_LNG_1093_STAN-0B13F_2022-02-10.tiff Unavailable Download
IM25 KM_LNG_1105_STAN-0B16C_2022-02-08.tiff Unavailable Download
IM28 KM_LNG_1111_STAN-09A18_2022-02-08.tiff Unavailable Download
IM4 Gut_AMSbio_neg_Nucleus_autofluorescence_SA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM16 STAN-098D2_2022-02-25.tiff Unavailable Download
IM9 Trachea_WT3_Japan_IgA_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM79 KM_LNG_00E5_A42-LNG_Nucleus_SCGB1A1_FOXJ1_ALDH1A3_Meas2_A2_F1T0.ome.tif Unavailable Download
IM96 Fig4gED10j_Day3-IgA2.tif Unavailable Download
IM104 Fig5j_Hoechst-637LNG-2R3.tif Unavailable Download
IM116 FigED9h_IgD+IgGimage-Hoechst.tif Unavailable Download
IM13 KM_LNG_1051_A47-LNG_Nucleus_IgA2 (IHC)_CCR10_CCL28_Meas2_A02_F1T1_max.ome.tif Unavailable Download
IM102 Fig5j_637cLNG-2R3-Hoechst.tif Unavailable Download
IM29 KM_LNG_1112_STAN-098C3_2022-02-08.tiff Unavailable Download
IM15 STAN0B0F6_2022-02-25.tiff Unavailable Download
IM38 KM_LNG_1196_STAN-0B1B7_2022-03-02.tiff Unavailable Download
IM49 KM_LNG_00P6_A47-LNG_Nucleus_CCL21_CCL19_ACTA2_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM105 Fig5kED10i10k_Day1-CD3.tif Unavailable Download
IM87 Fig4gED10j_Day1-CD31.tif Unavailable Download
IM66 KM_LNG_00DY_A37-LNG_Nucleus_MUC5B_LPO_ALDH1A3_Meas3_A1_F1T0.ome.tif Unavailable Download
IM19 STAN-0B102_2022-02-25.tiff Unavailable Download
IM75 KM_LNG_00DX_A42-LNG_Nucleus_MUC5B_LPO_MIA_Meas2_A1_F2T0.ome.tif Unavailable Download
IM90 Fig4gED10j_Day1-Hoechst.tif Unavailable Download
IM23 KM_LNG_1104_STAN-098A5_2022-02-08.tiff Unavailable Download
IM30 KM_LNG_1113_STAN-0B18A_2022-02-09.tiff Unavailable Download
IM27 KM_LNG_1106_STAN-0B0C9_2022-02-08.tiff Unavailable Download
IM52 KM_LNG_00NX_A47-LNG_Nucleus_FHOD3_ALDH1A3_LPO_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM71 KM_LNG_00DV_A42-LNG_Nucleus_MUC5B_LPO_RARRES1_Meas2_A1_F1T0.ome.tif Unavailable Download
IM69 KM_LNG_00HA_A48-LNG_Nucleus_MUC5B_LPO_ALDH1A3_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM80 KM_LNG_00HF_A41-LNG_Nucleus_SCGB1A1_FOXJ1_ALDH1A3_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM89 Fig4gED10j_Day1-HLA-DR.tif Unavailable Download
IM8 Trachea_WT2_Japan_IgA_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM63 KM_LNG_00FT_A42-LNG_Nucleus_MPZ_ANGPTL7_THBS4_Meas2_max_A2_F1T0.ome.tif Unavailable Download
IM114 FigED9h_IgA2image-Hoechst.tif Unavailable Download
IM51 KM_LNG_00NW_A47-LNG_Nucleus_TAGLN_PLD5_KRT14_Meas2_A2_F2T0_max.ome.tif Unavailable Download
IM39 KM_LNG_1198_STAN-0BE92_2022-03-02.tiff Unavailable Download
IM62 KM_LNG_00FS_A37-LNG_Nucleus_MPZ_ANGPTL7_THBS4_Meas2_max_A2_F1T0.ome.tif Unavailable Download
IM118 FigED9h_IgD+IgGimage-IgG.tif Unavailable Download
IM103 Fig5j_HLA-DR-637LNG-2R3.tif Unavailable Download
IM58 KM_LNG_00Q2_A41-LNG_Nucleus_PDZRN4_SCN7A_MLIP_Meas3_A2_F1T1_max.ome.tif Unavailable Download
IM7 Trachea_AMSbio_IgA_3_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM50 KM_LNG_00NV_A47-LNG_Nucleus_TAGLN_FHOD3_KRT14_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM78 KM_LNG_00E4_A37-LNG_Nucleus_SCGB1A1_FOXJ1_ALDH1A3_Meas2_A2_F1T0.ome.tif Unavailable Download
IM99 Fig4gED10j_Day4-Hoechst.tif Unavailable Download
IM18 STAN-0991B_2022-02-25.tiff Unavailable Download
IM54 KM_LNG_00PY_A37-LNG_Nucleus_PDZRN4_SCN7A_MLIP_Meas2_A2_F1T1_max.ome.tif Unavailable Download
IM26 KM_LNG_1094_STAN-0B09C_2022-02-10.tiff Unavailable Download
IM94 Fig4gED10j_Day3-EpCAM.tif Unavailable Download
IM57 KM_LNG_00Q1_A42-LNG_Nucleus_SOX10_SCN7A_SLC2A1_Meas4_A2_F1T1_max.ome.tif Unavailable Download
IM53 KM_LNG_00P4_A47-LNG_Nucleus_PLD5_ALDH1A3_LPO_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM73 KM_LNG_00H8_A48-LNG_Nucleus_MUC5B_LPO_RARRES1_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM35 1102_STAN-0B0BA_2022-02-11.tiff Unavailable Download
IM34 KM_LNG_1097_STAN-0B14E_2022-02-11.tiff Unavailable Download
IM55 KM_LNG_00PZ_A37-LNG_Nucleus_SOX10_SCN7A_SLC2A1_Meas2_A2_F1T1_max.ome.tif Unavailable Download
IM3 Gut_AMSbio_IgA_3_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM100 Fig4gED10j_Day4-Phalloidin.tif Unavailable Download
IM109 Fig5kED10i10k_Day1-Hoechst.tif Unavailable Download
IM65 KM_LNG_00PW_A37-LNG_Nucleus_ACTA2_PTPRC_CCL21_CCL19_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM17 STAN-09A27_2022-02-25.tiff Unavailable Download
IM48 KM_LNG_00P5_A47-LNG_Nucleus_CCL21_CCL19_ACKR1_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM76 KM_LNG_00H5_A41-LNG_Nucleus_MUC5B_LPO_MIA_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM112 Fig5kED10i10k_Day2-Hoechst.tif Unavailable Download
IM107 Fig5kED10i10k_Day1-CD45RO.tif Unavailable Download
IM5 Trachea_AMSbio_IgA_1_2_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM10 Trachea_AMSbio_neg_Nucleus_autofluorescence_SA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM81 KM_LNG_00HG_A48-LNG_Nucleus_SCGB1A1_FOXJ1_ALDH1A3_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM74 KM_LNG_00DW_A42-LNG_Nucleus_MUC5B_LPO_MIA_Meas2_A1_F1T0.ome.tif Unavailable Download
IM93 Fig4gED10j_Day2-IgD.tif Unavailable Download
IM85 KM_LNG_00HE_A48-LNG_Nucleus_SCGB1A1_FOXJ1_RARRES1_Meas2_A2_F1T0_max.ome.tif Unavailable Download
IM92 Fig4gED10j_Day2-Hoechst.tif Unavailable Download
IM1 Gut_AMSbio_IgA_1_2_Nucleus_autofluorescence_IgA_Meas1_A02_F1T0_max.ome.tif Unavailable Download
IM83 KM_LNG_00E3_A42-LNG_Nucleus_SCGB1A1_FOXJ1_RARRES1_Meas2_A2_F1T0.ome.tif Unavailable Download
IM36 KM_LNG_1195_STAN-09939_2022-03-02.tiff Unavailable Download
IM95 Fig4gED10j_Day3-Hoechst.tif Unavailable Download
IM88 Fig4gED10j_Day1-CD3.tif Unavailable Download